PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G01430.2
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 335aa    MW: 34927.8 Da    PI: 4.5924
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G01430.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.58.6e-07287309729
                      HHHHHHHHHHHHHHHHHHCTSCC CS
              HLH   7 erErrRRdriNsafeeLrellPk 29 
                      e+Er+RR+++N  + +Lr+l+P+
  ONIVA02G01430.2 287 EAERKRRKKLNGHLYKLRSLVPN 309
                      89********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGRGDHLLMK NSNAAAAAAA VNGGGTSLDA ALRPLVGSDG WDYCIYWRLS PDQRFLEMTG  60
FCCSSELEAQ VSALLDLPSS IPLDSSSIGM HAQALLSNQP IWQSSSEEEE ADGGGGAKTR  120
LLVPVAGGLV ELFASRYMAE EQQMAELVMA QCGGGGAGDD GGGQAWPPPE TPSFQWDGGA  180
DAQRLMYGGS SLNLFDAAAA DDDPFLGGGG DAVGDAAAAA GAWPYAGMAV SEPSVAVAQE  240
QMQHAAGGGV AESGSEGRKL HGGDPEDDGD GEGRSGGAKR QQCKNLEAER KRRKKLNGHL  300
YKLRSLVPNI TKVSYLLVDR HGHERIKSFF KSISV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1289296ERKRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.19e-21bHLH family protein