PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G45730.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 387aa    MW: 40697.4 Da    PI: 8.1181
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G45730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.31e-11321366655
                      HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +++Er RR ri +++ +L++l+P+     +k  + +++L  Av YIk+Lq
  ONIVA01G45730.1 321 SIAERERRTRISKRLKKLQDLVPNM----DKQTNTSDMLDIAVTYIKELQ 366
                      689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MNRMTAPHGG MPPPPMPAAG GLARYGSAPG SLLASIADSV IRGRGVGVVD QLHHHQHQHQ  60
LPPPPPPQQQ QMVGRYFSAE SSGLTSCESS CRTTTTTSTA AAADVGRHPL ERAYGGSGEI  120
HVDASSAAVP LFRHSSSPAG LLSRLMADPH GNGMAATRGM GGYSGGGGDA GAMAHRRLSS  180
QWSFSRQDLP QISEMGGLIP DIGESIVTGG GGNSSSDGAG HGAQSSSFLS SRNFSMSSWD  240
DTNSIMFSPP SSSKKARVAA AAAGDHGDDM VSSFSNIDSQ FGLSKQSSLE MAGMDDFLQL  300
QPDSVACRAR AKRGCATHPR SIAERERRTR ISKRLKKLQD LVPNMDKQTN TSDMLDIAVT  360
YIKELQGQVE KLKHDQANCT CSGKHDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.12e-47bHLH family protein