PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA01G40380.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 360aa MW: 37978.8 Da PI: 5.242

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G40380.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	70.6	2.3e-22	136	197	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSS..TTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaed..pkvveitYegeHnh 58 dDgy+WrKYGqK++++++fprsYYrC+++ +Cp++k+v++ + d p + +++Y+ eH++ ONIVA01G40380.1 136 DDGYQWRKYGQKKINNTNFPRSYYRCSYHrerRCPAQKHVQQRDGDdvPALHVVVYTHEHTC 197 8*************************99999***99887645678899****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MQAQSRLAAA ASGGGGSGIS GSGGISRLGG GAGEEHEAVV RELTRGHELT ARLRAEALRA 60 LRGQGQAEAT ATFILGEVSR AFTVCLSIMA SASPSASPPQ PDETPPADSA VSPPPPRAAR 120 EDNVPRKRLL TASPYDDGYQ WRKYGQKKIN NTNFPRSYYR CSYHRERRCP AQKHVQQRDG 180 DDVPALHVVV YTHEHTCLQG APAELPDAAT NGGAAAAASP DYFPAGGETP SSLRRLRGVG 240 GGGLQPQFVD HRAAMEERER QVLVSSLARV LQGRQCYDDD DDDDTDVASL GAVHARAPAA 300 AAAAPVAASS SSSGPVDAAG EELDVMDYDM TDALFWGPFG TDSNSYDGNL TSTRCFDLIN

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MQAQSRLAAA ASGGGGSGIS GSGGISRLGG GAGEEHEAVV RELTRGHELT ARLRAEALRA  60
LRGQGQAEAT ATFILGEVSR AFTVCLSIMA SASPSASPPQ PDETPPADSA VSPPPPRAAR  120
EDNVPRKRLL TASPYDDGYQ WRKYGQKKIN NTNFPRSYYR CSYHRERRCP AQKHVQQRDG  180
DDVPALHVVV YTHEHTCLQG APAELPDAAT NGGAAAAASP DYFPAGGETP SSLRRLRGVG  240
GGGLQPQFVD HRAAMEERER QVLVSSLARV LQGRQCYDDD DDDDTDVASL GAVHARAPAA  300
AAAAPVAASS SSSGPVDAAG EELDVMDYDM TDALFWGPFG TDSNSYDGNL TSTRCFDLIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	1e-17	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G40380.1