PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA01G37010.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 275aa    MW: 30105.7 Da    PI: 6.2596
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA01G37010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.81.9e-08131191454
                      HHHHHHHHHHHHHHHHHHHHHCTSCC.C...............TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPk.as............kapskKlsKaeiLekAveYIksL 54 
                       h +rEr RR+r+ ++++ L+ +lP+ as              +     K +i+  A +YI++L
  ONIVA01G37010.1 131 RHIMRERLRRERLSQGYADLQAILPTgASsskvlvkslirnYMS---GGKNTIVAAAANYIREL 191
                      599***********************997777777775444222...33556777888888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MENDDDVEHP FYYFVHDDAA AGVDDHEELL ASLGFLLPPP PPPPPPPQPD QGRSAFAAYQ  60
STAAMASSSS SSESLSRRYH SSASNVHRRM YRFLRSIYDD AGDDAGATAE MQPAEGEQQQ  120
AAPSGGSARF RHIMRERLRR ERLSQGYADL QAILPTGASS SKVLVKSLIR NYMSGGKNTI  180
VAAAANYIRE LEGRKGWLCA QNELLERTTP KPGAGMVVKV RAESELGSTV DVFEAVLRRL  240
KAMDELQVTA IQSWFGAGGM WMDVAVESKK QVRST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137142RLRRER