PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA01G36110.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CPP

Protein Properties

Length: 590aa MW: 63667.4 Da PI: 9.4022

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G36110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41	3.9e-13	158	196	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +kk CnCk+skClk+YCeCfa+g++C+ C+C++C+N+ + ONIVA01G36110.1 158 KKKCCNCKHSKCLKLYCECFASGVYCDG-CNCSNCFNNVK 196 799***********************.******987 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MAGKEQQGGG GPPPPPRAPV PAASSQPPIK KLVRQLDFTS AALAGNPAMA AAAAAVSRAL 60 QPRAVPVGFP QPQQLRAHLP VGVPQQLHPR GLPVMRSHHV VHVPLPRPAV AVAVPVPQVR 120 PAQPQPVPRP PVAVPLKPES PKPPRARLYE GKDGTPTKKK CCNCKHSKCL KLYCECFASG 180 VYCDGCNCSN CFNNVKNETA RREAIDATLE RNPDAFRPKI GSSPHANRNN MEAAGDLPLV 240 GKHNKGCHCK KSGCLKKYSN AAVNGAIGAA AFSSPSTSRK RKHIDPSLDH SAKENGAHRT 300 NHVPQKNGMP SDGPLPINQP VHPPTLGPFK VTYRPLLADI VQPGDVKELC KLLVVVSGNA 360 AKAYAGMTTF IHWELSHWET GKKSQEDKVV EKEDEMGGKR EGEIGGSLAS TNHDREENNK 420 DPNNQKASAD DPSTGGTRAG KASLEESKHD CNDDQKSNRP MSPGTLALMC DEQDTMFMTS 480 QNVVPQQPAP VNQNQSELYA EQERCVLTEF RDCLHKLVTF GRMKEEKFSM AIKSEVPAHP 540 MQANGVSRIP YSKEVDVPVV KTFLQSSSRH PAAGNSATGH LDKKPKHENT

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MAGKEQQGGG GPPPPPRAPV PAASSQPPIK KLVRQLDFTS AALAGNPAMA AAAAAVSRAL  60
QPRAVPVGFP QPQQLRAHLP VGVPQQLHPR GLPVMRSHHV VHVPLPRPAV AVAVPVPQVR  120
PAQPQPVPRP PVAVPLKPES PKPPRARLYE GKDGTPTKKK CCNCKHSKCL KLYCECFASG  180
VYCDGCNCSN CFNNVKNETA RREAIDATLE RNPDAFRPKI GSSPHANRNN MEAAGDLPLV  240
GKHNKGCHCK KSGCLKKYSN AAVNGAIGAA AFSSPSTSRK RKHIDPSLDH SAKENGAHRT  300
NHVPQKNGMP SDGPLPINQP VHPPTLGPFK VTYRPLLADI VQPGDVKELC KLLVVVSGNA  360
AKAYAGMTTF IHWELSHWET GKKSQEDKVV EKEDEMGGKR EGEIGGSLAS TNHDREENNK  420
DPNNQKASAD DPSTGGTRAG KASLEESKHD CNDDQKSNRP MSPGTLALMC DEQDTMFMTS  480
QNVVPQQPAP VNQNQSELYA EQERCVLTEF RDCLHKLVTF GRMKEEKFSM AIKSEVPAHP  540
MQANGVSRIP YSKEVDVPVV KTFLQSSSRH PAAGNSATGH LDKKPKHENT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	6e-80	CPP family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G36110.1