PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA01G35260.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HSF

Protein Properties

Length: 440aa MW: 49387.4 Da PI: 5.0936

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G35260.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.2	1.4e-34	13	103	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 Fl+k+ye+++d++++ ++ w+ g+sfvv ++ ef +++LpkyFkh+nf+SFvRQLn+YgF+kv+ e+ weF+++ F kg+++ l+ ONIVA01G35260.1 13 FLSKTYEMVDDPSTDAVVGWTPAGTSFVVANQPEFCRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPEQ---------WEFANEDFIKGQRHRLK 97 9*************************************************************9998.........************* PP XXXXXX CS HSF_DNA-bind 96 kikrkk 101 +i+r+k ONIVA01G35260.1 98 NIHRRK 103 **98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MEGGGGGGSL PPFLSKTYEM VDDPSTDAVV GWTPAGTSFV VANQPEFCRD LLPKYFKHNN 60 FSSFVRQLNT YGFRKVDPEQ WEFANEDFIK GQRHRLKNIH RRKPIFSHSS HSQGAGPLTD 120 NERKDYEEEI ERLKSDNAAL SSELQNNTLK KLNMEKRMQA LEEKLFVVED QQRSLISYVR 180 EIVKAPGFLS SFVQQQDHHR KKRRLPIPIS FHEDANTQEN QIMPCDLTNS PAQTFYRESF 240 DKMESSLNSL ENFLREASEE FGNDISYDDG VPGPSSTVVL TELHSPGESD PRVSSPPTRM 300 RTSSAGAGDS HSSRDVAEST SCAESPPIPQ MHSRVDTRAK VSEIDVNSEP AVTETGPSRD 360 QPAEEPPAVT PGANDGFWQQ FLTEQPGSSD AHQEAQSERR DGGNKVDEMK SGDRQHLWWG 420 KRNVEQITEK LGLLTSTEKT

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MEGGGGGGSL PPFLSKTYEM VDDPSTDAVV GWTPAGTSFV VANQPEFCRD LLPKYFKHNN  60
FSSFVRQLNT YGFRKVDPEQ WEFANEDFIK GQRHRLKNIH RRKPIFSHSS HSQGAGPLTD  120
NERKDYEEEI ERLKSDNAAL SSELQNNTLK KLNMEKRMQA LEEKLFVVED QQRSLISYVR  180
EIVKAPGFLS SFVQQQDHHR KKRRLPIPIS FHEDANTQEN QIMPCDLTNS PAQTFYRESF  240
DKMESSLNSL ENFLREASEE FGNDISYDDG VPGPSSTVVL TELHSPGESD PRVSSPPTRM  300
RTSSAGAGDS HSSRDVAEST SCAESPPIPQ MHSRVDTRAK VSEIDVNSEP AVTETGPSRD  360
QPAEEPPAVT PGANDGFWQQ FLTEQPGSSD AHQEAQSERR DGGNKVDEMK SGDRQHLWWG  420
KRNVEQITEK LGLLTSTEKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	7e-88	HSF family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G35260.1