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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | ONIVA01G33470.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family | MYB | ||||||||
| Protein Properties | Length: 298aa MW: 31745.2 Da PI: 4.6593 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 46 | 1.2e-14 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd +l v+++G+ +W + +++ g++R++k+c++rw++yl
ONIVA01G33470.1 14 RGPWSEEEDAILRSFVERFGNAgNWIALPHKAGLKRCGKSCRLRWLNYL 62
89******************99*************************97 PP
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| 2 | Myb_DNA-binding | 43.9 | 5.4e-14 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +T eEd l++ ++ ++G++ W+ Ia++++ gRt++++k++w++
ONIVA01G33470.1 69 GGFTDEEDNLILSLFGEMGSK-WSVIASKLP-GRTDNDVKNYWNT 111
569******************.*********.***********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 298 aa Download sequence |
MGRSPCCDKA SVKRGPWSEE EDAILRSFVE RFGNAGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPAIRHGG FTDEEDNLIL SLFGEMGSKW SVIASKLPGR TDNDVKNYWN TKLKKRYLAA 120 AATEATTPPP PAAGDDDNNP TTQASSQPAP PTPPAPLVNL DAAGLDGAVG DNDELLLHKS 180 EQLYAELMGL IEQQQYSTIT AAAVDAATTT TSWSSPSTGT TSPTASSSTD GSSSSSNLPW 240 PAVDVHDSTM MPPLSESSGS SSGLFFGSHA FGSGSFQDLL GSAASFDDVM LSQEMLYY |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G36890.1 | 6e-66 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | ONIVA01G33470.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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