PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA01G32170.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 393aa MW: 40296.7 Da PI: 7.0573

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G32170.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19	2.5e-06	290	330	9	54
HHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 r RR+r+ +++ L++l+P + K++ a++L +A Y+k L ONIVA01G32170.1 290 ARLRRERVSDRLRVLQKLVPGgN------KMDTASMLDEAASYLKFL 330 599***************955......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
METFGWAGGG QLMHHDDIYL PRSVGCGRPF ELDDAFLGAC FGAQLQCDGG VGGGDGGGCL 60 QGTSGFGAVA GDPLGLLCSG DVFASVAEGA GGAHDDGLLD AALAFSRNQL GGAACDGSDG 120 GAVSNGAMLS SYSGTTGGNI SSGESNNYSG GGGGYDAEVV SPTSTMSAAT QSLHPKRKLY 180 DDHHHPAGIA AAAAAPPLAP CPRPTTGAVA AKRRASTSAT SITFGHQPHH HHAGATTAGY 240 EPDMEAMAQV KEMIYRAAAM RPVHLGTEAA ADKPRRKNVR ISSDPQTVAA RLRRERVSDR 300 LRVLQKLVPG GNKMDTASML DEAASYLKFL KSQVQKLETL GTTTTTSKLP QQYYSGNINS 360 SNNHHGFLGF AANNNTISAG YANSNAGNAT KLL

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

METFGWAGGG QLMHHDDIYL PRSVGCGRPF ELDDAFLGAC FGAQLQCDGG VGGGDGGGCL  60
QGTSGFGAVA GDPLGLLCSG DVFASVAEGA GGAHDDGLLD AALAFSRNQL GGAACDGSDG  120
GAVSNGAMLS SYSGTTGGNI SSGESNNYSG GGGGYDAEVV SPTSTMSAAT QSLHPKRKLY  180
DDHHHPAGIA AAAAAPPLAP CPRPTTGAVA AKRRASTSAT SITFGHQPHH HHAGATTAGY  240
EPDMEAMAQV KEMIYRAAAM RPVHLGTEAA ADKPRRKNVR ISSDPQTVAA RLRRERVSDR  300
LRVLQKLVPG GNKMDTASML DEAASYLKFL KSQVQKLETL GTTTTTSKLP QQYYSGNINS  360
SNNHHGFLGF AANNNTISAG YANSNAGNAT KLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	272	278	DKPRRKN
2	273	278	KPRRKN
3	291	296	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	2e-34	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G32170.1