PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA01G29490.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 350aa MW: 37882.4 Da PI: 9.2608

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G29490.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	101.5	1.2e-31	70	226	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpk...............kvkaeekewyfFskrdkkyatg 71 lp+G++F+Ptd+el+ e+L+ k++ + ++++ i+ +i++++P++Lp +v ++ +fF++ +k+y+tg ONIVA01G29490.1 70 LPAGVKFDPTDQELL-EHLEGKARPDArklhplIDEFIPtIEGEnGICYTHPERLPGtsgrdvetigavrhgRVGKDGLIRHFFHRPSKAYTTG 162 799**********.99998885665443333333665557******5589999988866544333333355********* PP NAM 72 krknratk......sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +rk+r+++ + +W++tgk+++v++ +g+l+g kk+Lv+y g+++k+ekt+Wvmh+y+l ONIVA01G29490.1 163 TRKRRKVHtdeqggETRWHKTGKTRPVFT-GGKLKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 226 *744456555778********.9*********6657999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MTWCNSFNDV RAVENNLATA AAVAAAKKQQ QQQQQVSQHV NLIKTCPSCG HRAQYEQAAA 60 AATIQDLPGL PAGVKFDPTD QELLEHLEGK ARPDARKLHP LIDEFIPTIE GENGICYTHP 120 ERLPGTSGRD VETIGAVRHG RVGKDGLIRH FFHRPSKAYT TGTRKRRKVH TDEQGGETRW 180 HKTGKTRPVF TGGKLKGYKK ILVLYTNYGK QRKPEKTNWV MHQYHLGSDE EEKDGELVVS 240 KVFYQTQPRQ CGGGSAATAK DLSVDLVAGN NIKASNAAAE HHHNDGVGGG GHGGNNSSML 300 KEAAGIVDFY NPAAALIGYS QAAPNNRAAA SAHLTMPNFE VHTGGAGFGP

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MTWCNSFNDV RAVENNLATA AAVAAAKKQQ QQQQQVSQHV NLIKTCPSCG HRAQYEQAAA  60
AATIQDLPGL PAGVKFDPTD QELLEHLEGK ARPDARKLHP LIDEFIPTIE GENGICYTHP  120
ERLPGTSGRD VETIGAVRHG RVGKDGLIRH FFHRPSKAYT TGTRKRRKVH TDEQGGETRW  180
HKTGKTRPVF TGGKLKGYKK ILVLYTNYGK QRKPEKTNWV MHQYHLGSDE EEKDGELVVS  240
KVFYQTQPRQ CGGGSAATAK DLSVDLVAGN NIKASNAAAE HHHNDGVGGG GHGGNNSSML  300
KEAAGIVDFY NPAAALIGYS QAAPNNRAAA SAHLTMPNFE VHTGGAGFGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-120	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G29490.1