PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA01G28750.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GATA

Protein Properties

Length: 242aa MW: 24948.8 Da PI: 7.0078

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G28750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	63.5	2.5e-20	124	158	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++ ONIVA01G28750.1 124 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 158 ********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MLHEAAPCTC GLLYGSCGGG CSLLFPAGAP GDHHHHHYYK QYCGAGDGEY PDVPYGGGGS 60 VDCTLSLGTP STRRAEAAVA GLPWDQSSLQ PSCNGRQEMS GAAAPRTEPS GGAGAAAASA 120 PRRCANCDTT STPLWRNGPR GPKSLCNACG IRYKKEERRA AAAAVAPTAL ASDGGVEYAY 180 GYPRQQQQWG CYGPAVAKAA SFGMFGDAAG EDGPCLPWGL GVMPSSPAFG AVREMPSLFQ 240 YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18380.1	1e-26	GATA family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G28750.1