PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA01G21910.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Nin-like

Protein Properties

Length: 452aa MW: 48959.5 Da PI: 6.3877

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G21910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	85.3	5.5e-27	295	344	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i +edl++yF++pi++AA+e++v+lTvLK++CR++G++RWPhRk+ksl ONIVA01G21910.1 295 DHIGFEDLRRYFYMPITKAAREMNVGLTVLKKRCRELGVARWPHRKMKSL 344 6899********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MEMHECCYYG GSTGGDWLNP LAAIPPPCSS SSSSWSSQLL LLSDHDDVLL HSAGDHGGAV 60 AGIGGACMTA DLVNLNGFDH VVIRDEEMEM AAGYLPVAAS AAAAADVDHY MYQQFQLEPD 120 QFVSTLPAVA VAVAVAATAG GGSHDDELLR MPFTDIDLDA FADARDVVVG VGEPKPSPQH 180 TLDAAIALPA VGGGGAHHFG TQDDDVKFDV TKQRNDAALA GDDSLSMVIV ESYEMGMRRH 240 AAEQEQEQKP KIITSAATTL TPLPLPPPPP PPPRVTRSRR DGSSAATAGG KTRLDHIGFE 300 DLRRYFYMPI TKAAREMNVG LTVLKKRCRE LGVARWPHRK MKSLKSLILN EMGSKGMSAA 360 AMRRELEALE NCCALMERNP AVELTERTKK LRQACFKENY KRRRAAAVDV LDLDHCFSFA 420 AGHCHHHHHQ QLALPPPPAA AADHRRRDFF GY

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MEMHECCYYG GSTGGDWLNP LAAIPPPCSS SSSSWSSQLL LLSDHDDVLL HSAGDHGGAV  60
AGIGGACMTA DLVNLNGFDH VVIRDEEMEM AAGYLPVAAS AAAAADVDHY MYQQFQLEPD  120
QFVSTLPAVA VAVAVAATAG GGSHDDELLR MPFTDIDLDA FADARDVVVG VGEPKPSPQH  180
TLDAAIALPA VGGGGAHHFG TQDDDVKFDV TKQRNDAALA GDDSLSMVIV ESYEMGMRRH  240
AAEQEQEQKP KIITSAATTL TPLPLPPPPP PPPRVTRSRR DGSSAATAGG KTRLDHIGFE  300
DLRRYFYMPI TKAAREMNVG LTVLKKRCRE LGVARWPHRK MKSLKSLILN EMGSKGMSAA  360
AMRRELEALE NCCALMERNP AVELTERTKK LRQACFKENY KRRRAAAVDV LDLDHCFSFA  420
AGHCHHHHHQ QLALPPPPAA AADHRRRDFF GY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	5e-31	Nin-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G21910.1