PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA01G16940.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 554aa MW: 59200.1 Da PI: 4.6468

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G16940.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	79.9	5.6e-25	39	175	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkya..tgkrknratksgyWkatgk 88 +p+G+ F P+d el L+ k+ +++ l++v+++++i++++P L+ + + +ee+ +yfFs+r+ +++ +++r++r++k g+Wka+g ONIVA01G16940.1 39 MPVGCYFVPKDLELFAI-LRCKLVRSQlpGALNNVFEHIRILEFHPALLHeTYIGNEEDgYIYFFSRRQFATKarNKRRPTRVAKGGTWKASGG 131 699**********66.6666555552334456799********84455555553569999998554433899999********* PP NAM 89 dkevlsk..kgelvglkktLvfy...kgrapkgektdWvmheyr 127 +k++ sk +g +vg k t+vfy + ++++ kt+W mhe++ ONIVA01G16940.1 132 SKTLRSKkvGGIDVGQKLTMVFYerrFEGDQNPIKTNWGMHEFT 175 998888899******43313456678******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MAEQPLGGGG GGGGDGNNNG KWKGKEKVVP EYGKNRHGMP VGCYFVPKDL ELFAILRCKL 60 VRSQLPGALN NVFEHIRILE FHPALLHETY IGNEEDGYIY FFSRRQFATK ARNKRRPTRV 120 AKGGTWKASG GSKTLRSKKV GGIDVGQKLT MVFYERRFEG DQNPIKTNWG MHEFTKIIDG 180 SKNQLEDLAV YRLYKIKRKE DEEPVNAAAA ASSTDEPSTS SALPPPTPPR PLPDMAGPSS 240 ATPLLPLQLP GLAGSSSAMS LPVPLQLPGL AGSSSAMSLP AQQMPGMAGS SSAMPLPLSL 300 PGLAGGMMSM ADQANMASTS QASTPSSELL QDWYDEFEIT YGAVAPPSPS TISWEEPQSS 360 PTGWWPSPNG EPVQHDGYLG MAANPTSYML EHPLPTAAIP PEPMTPPTSS PAPPPAVDNH 420 HRLSPPHDAA GSNYNHPELA GYNGGVQAQH EHQHQPQEPQ PALLVDGEDG YGAIADGDGD 480 TQLGVAELDT ERIAEMVNHI MDGEFEFKFE DNTVLKYNEV FPDDDKVVAA PMMIDGGGDG 540 DGADGGDGGD PFDN

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MAEQPLGGGG GGGGDGNNNG KWKGKEKVVP EYGKNRHGMP VGCYFVPKDL ELFAILRCKL  60
VRSQLPGALN NVFEHIRILE FHPALLHETY IGNEEDGYIY FFSRRQFATK ARNKRRPTRV  120
AKGGTWKASG GSKTLRSKKV GGIDVGQKLT MVFYERRFEG DQNPIKTNWG MHEFTKIIDG  180
SKNQLEDLAV YRLYKIKRKE DEEPVNAAAA ASSTDEPSTS SALPPPTPPR PLPDMAGPSS  240
ATPLLPLQLP GLAGSSSAMS LPVPLQLPGL AGSSSAMSLP AQQMPGMAGS SSAMPLPLSL  300
PGLAGGMMSM ADQANMASTS QASTPSSELL QDWYDEFEIT YGAVAPPSPS TISWEEPQSS  360
PTGWWPSPNG EPVQHDGYLG MAANPTSYML EHPLPTAAIP PEPMTPPTSS PAPPPAVDNH  420
HRLSPPHDAA GSNYNHPELA GYNGGVQAQH EHQHQPQEPQ PALLVDGEDG YGAIADGDGD  480
TQLGVAELDT ERIAEMVNHI MDGEFEFKFE DNTVLKYNEV FPDDDKVVAA PMMIDGGGDG  540
DGADGGDGGD PFDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	2e-13	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G16940.1