PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G14120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 428aa MW: 47736.4 Da PI: 6.6424 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l + ++++G g+W+t+++ g+ R++k+c++rw +yl ONIVA01G14120.1 14 KGLWSPEEDEKLMNHITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.1 | 2.7e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE++l+v++++ lG++ W+ Ia +++ gRt++++k+ w++ ONIVA01G14120.1 67 RGAFSQEEEDLIVELHAVLGNR-WSQIATRLP-GRTDNEIKNLWNS 110 89********************.*********.*********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 428 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSTV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQEEEDLIVE LHAVLGNRWS QIATRLPGRT DNEIKNLWNS CIKKKLRQKG 120 IDPNTHKPLA EVDRSKATPT ISNDRTSESS DVDPSSGVAL HNLSHLLSET AQSSELLPVK 180 VTKPRTQAPG LARLKVPPKE LFLDQLTSGH ENLPSCRSSG PIPNFPFQQL LCYNNDFNSM 240 DVGNRNSLWY NQNESSSSTI STVMPPVSPS TLSTSTGLNP SPDNANSRGT GIHNSQFYWD 300 TNNPSSSSST GSSGNNGLGF ELQSTSSLLE TNIFPWSDLA PEKDSQAQLE EELKWPDLLH 360 GTFSEMPAPM QNLSQSLYED VVKAESQFNM EGLCAAWSQN LLPQQHLPVV SDMYDKDLQR 420 MSLSFENI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09540.1 | 3e-91 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G14120.1 |