PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA01G10670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 993aa MW: 108624 Da PI: 4.7701 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.4 | 1.6e-18 | 51 | 97 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l ONIVA01G10670.1 51 KGNWTPEEDAILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 97 79******************************.************986 PP | |||||||
2 | Myb_DNA-binding | 62.3 | 9.6e-20 | 103 | 149 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde++v+ v++lG++ W+tIa+ ++ gR +kqc++rw+++l ONIVA01G10670.1 103 KGPWSKEEDEIIVQMVNKLGPKKWSTIAQALP-GRIGKQCRERWYNHL 149 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 48.5 | 2e-15 | 155 | 197 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ ONIVA01G10670.1 155 KEAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 197 579*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 993 aa Download sequence |
MMTSDNGKAP DKDGESSGPP LAPQEGEISN EPKRRRPLNG RTTGPTRRST KGNWTPEEDA 60 ILSRAVQTYN GKNWKKIAEC FPDRTDVQCL HRWQKVLNPE LVKGPWSKEE DEIIVQMVNK 120 LGPKKWSTIA QALPGRIGKQ CRERWYNHLN PGINKEAWTQ EEEITLIHAH RMYGNKWAEL 180 TKFLPGRTDN SIKNHWNSSV KKKVNSYMSS GLLTQVSCLP LNEYSANCNS SPAMTQQNSE 240 DSGCFAVREV ENSSGCSQSS LAKVSCSQVH DNTVPLGCDL QVNTNFDKNE AHDSQSSMGS 300 EACYTSAEAV ASALPAVHCH VSSSNLDPDQ HLQEDFAQGL NLDMTIDEMP TVPSFADNQT 360 VCSIENHERS LEPYDVAMEV PLSMLSSDSG AEQKLHFMSE ADFNSPNCLK SELWQDISLQ 420 GLLSGPDAVE ADSFSRSNHQ SDVYSSEADT HFLAPPYMPQ ASNSSSVMGV ADDQSPQMSV 480 PPSLICSNVM TDDAPFDNRP GRKEMPLSQA EVVTQSSSSS GDAEMFANPG CSNDRHVPSS 540 TMESIPECGD QQVTNAEEPE ASLEKEPSLT QSVTAPDEQD KGALFYEPPR FPSLDVPFVS 600 CDLVTSGDLQ EFSPLGIRQL MHSTMNVCTP MRLWGSPTHD ESTGVLLKSA AKSFICTPSI 660 LKKRHRDLLS PIPDKRIEKK YGTEKDRGVS DTSSTGIQTS SINATKDDAL ITTVLRIERS 720 ASSKSLEKKL VFSDENKENL GYTTEQTKDG QSAGNDEHMD EQTTGERSSA TNVATNDDLS 780 GNLQPAGILI EHSGDDPISP DYGKNTMNQK LNTNVKSLSV CKEGVCAKSK PTELIVEKSS 840 PCINVDYEYV NILADTPGIK RGLESPSAWK SPWFVDMHFQ GSYFTSPADS YDALGLMKQI 900 NVQTAAALVE AREVLASGGQ CDNISSDKEN TGNPDAKKEP GTTKLQTKIM AEGRVLDFEC 960 TTPVRSSDKN AGSSLGRYLS SPIPSSHLLK SFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.1 | 1e-136 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA01G10670.1 |