PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA01G06080.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 381aa MW: 40841.8 Da PI: 10.2296

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA01G06080.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.3	5.7e-32	203	261	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ ONIVA01G06080.2 203 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHS 261 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MFPSPGRAVM ALGHHGAARQ PPTTMAAAAS SSTTSAAAAP ATATTTVAFS FQHPTPTPSH 60 HHHHHGVLGY SPLVLDHHHP TTAAASSHAP SPPTLHHHHG GGLHAAAPPP RSSPPHPWSC 120 EEGDHRGRPQ MGNKGEAAAA MGAMGINDAG NNTAAAAAAQ HHLGVGAVRM KKVGGGGGGG 180 GKARRKVREP RFCFKTMSDV DVLDDGYKWR KYGQKVVKNT QHPRSYYRCT QDNCRVKKRV 240 ERLAEDPRMV ITTYEGRHVH SPSRDDDDAA RASAEMTFIW NVPYGALLNS YGIPHFMPSP 300 STHASHLPPR GQLVASVDAC GPSDADRIFP LRSTARETRS RENINSSDLM DLSAIAIAHC 360 ISTKQPNHKV GASRERKKER Q

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MFPSPGRAVM ALGHHGAARQ PPTTMAAAAS SSTTSAAAAP ATATTTVAFS FQHPTPTPSH  60
HHHHHGVLGY SPLVLDHHHP TTAAASSHAP SPPTLHHHHG GGLHAAAPPP RSSPPHPWSC  120
EEGDHRGRPQ MGNKGEAAAA MGAMGINDAG NNTAAAAAAQ HHLGVGAVRM KKVGGGGGGG  180
GKARRKVREP RFCFKTMSDV DVLDDGYKWR KYGQKVVKNT QHPRSYYRCT QDNCRVKKRV  240
ERLAEDPRMV ITTYEGRHVH SPSRDDDDAA RASAEMTFIW NVPYGALLNS YGIPHFMPSP  300
STHASHLPPR GQLVASVDAC GPSDADRIFP LRSTARETRS RENINSSDLM DLSAIAIAHC  360
ISTKQPNHKV GASRERKKER Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	1e-45	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA01G06080.2