PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMP12218 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 21516.8 Da PI: 4.7128 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 36 | 86 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr+++ +g+Wv+eIr+p+ + r++lg+f tae+Aa a++ a+++l+g OMP12218 36 PVYRGVRRRS-SGKWVSEIREPR----KpNRIWLGTFPTAEMAAIAYDVAALALKG 86 68*****888.8*********94....478***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MHYSKSNKGS SSGRGGSGSG GGAGGGSSSA ATGRHPVYRG VRRRSSGKWV SEIREPRKPN 60 RIWLGTFPTA EMAAIAYDVA ALALKGQDAE LNFPNSAASL PVPASTSPRD IQAAATSAAA 120 ALGAANDALF GNEDQNEARN NPILPDKSAA MDEFVDEDLL FDMPNVLVNM AEGMLLSPPR 180 LDINAPDQYP SADNLGDDEN LWKFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 9e-47 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMP12218 |