PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMP11639
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 117aa    MW: 13631.8 Da    PI: 6.5171
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMP11639genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3322.2e-106101496
               E-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
        B3   4 vltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
               +l+++ + +++ l +p  +++    ++ + + + + + d ++g+ W++ + +  + + ++  l+ GW +Fv+++++++gD++ ++ +++ + ++++ v
  OMP11639   6 KLITKTAVEKS-LLIPTCYFNGLhlEEGEGQFFHVNVIDdQTGKNWTFPCFIqqNEGLESSDLSIGWLRFVRDKDVRVGDMIFLY-QKSFDDNMKIEV 101
               45555555555.777777775556644455667777777699********666666667799*******************9888.333455556555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MTKFSKLITK TAVEKSLLIP TCYFNGLHLE EGEGQFFHVN VIDDQTGKNW TFPCFIQQNE  60
GLESSDLSIG WLRFVRDKDV RVGDMIFLYQ KSFDDNMKIE VKRKIRLLGQ DIWAPLV