PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMP07546 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | B3 | ||||||||
Protein Properties | Length: 113aa MW: 13356.4 Da PI: 9.1207 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56.2 | 6.1e-18 | 11 | 96 | 3 | 84 |
EE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkl 84 +++++ +++rl +p + + ++ + ++ ++ d +g++W++++i r+ +g+ ++++GW +Fv++n L++gD++vFkl OMP07546 11 RKTVRPTEITNHRLLVPTEAMWAFllqvD---SNKLDIEALDVNGKTWNFRYITRG-PGShhpqPYFSRGWMKFVRDNSLQAGDTIVFKL 96 55668899999*************97432...34568999************7644.3443677899**********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MEEEKSVEIF RKTVRPTEIT NHRLLVPTEA MWAFLLQVDS NKLDIEALDV NGKTWNFRYI 60 TRGPGSHHPQ PYFSRGWMKF VRDNSLQAGD TIVFKLRPFI DPIYFIEVLR KNC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25730.1 | 1e-11 | RAV family protein |
Link Out ? help Back to Top | |
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Ensembl | OMP07546 |