 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | OMO96969 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
|
||||||||
| Family | NAC | ||||||||
| Protein Properties | Length: 339aa MW: 38854.2 Da PI: 4.7462 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 180.6 | 3.9e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99
lppGfrFhPtdeelv +yL +k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rdkky++g+r+nrat+ gyWkatgkd++v s ++++
OMO96969 6 LPPGFRFHPTDEELVAYYLDRKITGRTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDKKYPNGSRTNRATRGGYWKATGKDRTVQS-QKRA 104
79****************************.99**************96435566888*************************************9.9999 PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
vg+kktLv+y+grap+g +t+Wvmheyrl
OMO96969 105 VGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133
***************************97 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 339 aa Download sequence |
MAPMSLPPGF RFHPTDEELV AYYLDRKITG RTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60 DMEWYFYSPR DKKYPNGSRT NRATRGGYWK ATGKDRTVQS QKRAVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLLNSSASA PSSLKDSYAL CRIFKKTIQI PSKRKDDDQG VDNNNNNTNN 180 NVDKEVGGWV SGDEQLFGDD GTEISRGREM EDDNLNTSSS DVTQGTPNET LITDDYQYEA 240 NSTSANNMCS FAADFSSSLI QEMRIPGYTN VHYQVPYPPL ELEDFPEINI TETKPSKPEI 300 IDEYMIYDKY RDHMNGSLEE IFSLCSSHID NSISLPMQD |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G54330.1 | 1e-110 | NAC family protein | ||||
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | OMO96969 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|