PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO91071 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | MYB | ||||||||
Protein Properties | Length: 260aa MW: 29855.6 Da PI: 6.1246 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.8 | 2.1e-07 | 24 | 70 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT +d+l+ +a +++ + +W +Ia++++ g+++ ++k ++ ++ OMO91071 24 HWTRLDDKLFEQALVMFPEEtpdRWLKIAERVP-GKSPMEVKAHYEML 70 5*****************99*************.***********877 PP | |||||||
2 | Myb_DNA-binding | 26.8 | 1.2e-08 | 151 | 190 | 8 | 47 |
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 E l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky OMO91071 151 ENRLFLVGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKY 190 56789999*******************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MFQDDNNNIN IISHNPFLTQ PSTHWTRLDD KLFEQALVMF PEETPDRWLK IAERVPGKSP 60 MEVKAHYEML LYDVCEIEAG RVEVPSYADD SFSVLSSDFD NQISFEPSKP KHHGESERKK 120 GTPWTEDEHR SCLYIVELCD SNLELIFIDI ENRLFLVGLS KFGKGDWRSI SRNVVVTRTP 180 TQVASHAQKY FLRQSSVKKE RKRSSIHDIT TVDSNTMDVP VDQNWIHRPG APVTMHQFSP 240 SSHLPAQGGS LGYQNYGFPM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 8e-73 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO91071 |