PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO90649 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 183aa MW: 20294.5 Da PI: 8.003 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 89.8 | 2.5e-28 | 9 | 58 | 5 | 57 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 Y+eCl+NhAaslG++a+DGCgEf+ + ++++++l+CaACgCHRnFHR+ OMO90649 9 LYRECLRNHAASLGSYATDGCGEFTLD---DTSPSTLQCAACGCHRNFHRKVI 58 7*************************8...6789****************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MEKEHPNDLY RECLRNHAAS LGSYATDGCG EFTLDDTSPS TLQCAACGCH RNFHRKVIYC 60 SSSRSRGDPE NTVELIEYGD GGGGGGSRRQ VVAESTEAAA ADRSGKKRFR TKFTVEQKEK 120 MLGFAEKLGW KLQRRDEEDE VEKFCRGIGV SRQVFKVWMH NHKNSSSASS LSTNCNASSL 180 TTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-40 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO90649 |