PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO90234
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family G2-like
Protein Properties Length: 324aa    MW: 35291.7 Da    PI: 7.293
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO90234genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.54.4e-11217242126
   G2-like   1 kprlrWtpeLHerFveaveqLGGsek 26 
               k+r++W+peLH+rF++a++qLGGs++
  OMO90234 217 KTRRCWSPELHRRFLHALQQLGGSHE 242
               68*********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MINMDFAQKM RRCHEYVEAL EEERRKIKVF QRELPLCLEL VTQAIEACKK EISGGTDYMQ  60
GQSECNSEQT SSDVPVLEEF IPIKKSSACS DDEQESHKSK DHDKEKNGGD KKKSDWLRSV  120
QLWNNNNQSP DPTSLKEDAG KSASAVEVKR NGGAFQPFHR EKTVEKSVES GAKANASATS  180
TSTTESGSRG GAAAANNNGN SSNSTKKEEK EGQAQRKTRR CWSPELHRRF LHALQQLGGS  240
HEYATMTATT ASGETPSATP TSGGIYAPVA APLPKLPQPS GAIVQRSQSE ERGSHSEGRF  300
HSNSNSPSAS SSTHTTTDSP VMFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.15e-72G2-like family protein