PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OMO90225

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 459aa MW: 50555.8 Da PI: 6.7583

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO90225	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.2	4.8e-10	174	215	5	46
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k rr+++NReAAr+sR+RKka++++Le+ L++ ++L+ OMO90225 174 KILRRLAQNREAARKSRLRKKAYVQQLENSRLRLTQLEQELQ 215 6679************************98777777666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MQSFKAATPT NPDMFCHSSF FLRGDDCNGR NQARFSDLGE LDHPAAAFHH DDAVDLSPSS 60 IFSLKSSNVG VVATGLHYGA LNTSIGATEI VSTGTGCLDT GQFMYQKGTT FGASLGNGHI 120 ENWGESGLAD NSQQTDTSTD VDTDDKNQLH GVQHGAIITV DSVDQSKTKT GDQKILRRLA 180 QNREAARKSR LRKKAYVQQL ENSRLRLTQL EQELQKARQQ GMFIASGLSA EHGHSIGNGA 240 LAFGVDYARW LDEHQRLIND LRSAVNSHMG DNELRILVDA VMAHYDEIYR LKSIATKADV 300 FHMLSGMWKT PAERCFMWLG GYRSSEFLKI LGNHLEPLTD QQLMGICNLQ QSSQQAEDAL 360 SQGMEALQQS LVDTLSSACL GPTGSGNVAD YMGQMAIAMG KLATLENFLH QADLLRQQTL 420 QQLHRILTTR QAARALLVIN DYTSRLRALS SLWLARPRN

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MQSFKAATPT NPDMFCHSSF FLRGDDCNGR NQARFSDLGE LDHPAAAFHH DDAVDLSPSS  60
IFSLKSSNVG VVATGLHYGA LNTSIGATEI VSTGTGCLDT GQFMYQKGTT FGASLGNGHI  120
ENWGESGLAD NSQQTDTSTD VDTDDKNQLH GVQHGAIITV DSVDQSKTKT GDQKILRRLA  180
QNREAARKSR LRKKAYVQQL ENSRLRLTQL EQELQKARQQ GMFIASGLSA EHGHSIGNGA  240
LAFGVDYARW LDEHQRLIND LRSAVNSHMG DNELRILVDA VMAHYDEIYR LKSIATKADV  300
FHMLSGMWKT PAERCFMWLG GYRSSEFLKI LGNHLEPLTD QQLMGICNLQ QSSQQAEDAL  360
SQGMEALQQS LVDTLSSACL GPTGSGNVAD YMGQMAIAMG KLATLENFLH QADLLRQQTL  420
QQLHRILTTR QAARALLVIN DYTSRLRALS SLWLARPRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-151	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO90225