PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO89355 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | TCP | ||||||||
Protein Properties | Length: 69aa MW: 7615.99 Da PI: 11.7632 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 78.3 | 2.2e-24 | 20 | 67 | 1 | 48 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdskti 48 aa+k+ +++++hTkv+gR+RR+R++ +c ar+F+L++eLG+++d++ti OMO89355 20 AAPKRASTKDRHTKVEGRGRRIRMPTTCVARIFQLTRELGHKSDGETI 67 689********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 69 aa Download sequence |
MAAVHVPSAL PMPLVTLPPA APKRASTKDR HTKVEGRGRR IRMPTTCVAR IFQLTRELGH 60 KSDGETIRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 4e-27 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO89355 |