PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO88588 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 20702.2 Da PI: 5.0869 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4.3e-19 | 14 | 64 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr +k +g+Wv+eIr+p gk++r++lg+f t+e+Aa+a++ a++ ++g OMO88588 14 SSYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFETPEMAAAAYDVAALHFRG 64 67*****999.**********8...557***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MEGKSGSSRG GLSSSYRGVR KRKWGKWVSE IREPGKKTRI WLGSFETPEM AAAAYDVAAL 60 HFRGREARLN FPELINCLPK PASSNADDIR MAAHEAALRI RTNAAAGSES GGGGGSCSNA 120 GSSSGLGPIT VRLSPTQIQA INESPLDSPK MWMQMSETLM MDESSMMFCN ENEEENLGWD 180 DMQNDPLWDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71450.1 | 8e-55 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO88588 |