PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OMO87914

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 281aa MW: 30828 Da PI: 8.9193

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO87914	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.9	6.1e-40	18	79	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 k++al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss OMO87914 18 KDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 79 7899******************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MEAAASRPLV ERRARPQKDQ ALNCPRCNST NTKFCYYNNY SLSQPRYFCK TCRRYWTEGG 60 SLRNVPVGGG SRKNKRSSSS TTSSPANSSK IKLADQVTPP ILSNSSSHQN PKIHEGQDLN 120 LAYPPPADHQ DYNNLSKFME VPYNKSNQPN STSSSTSTHH HLNAMELLKS SGISSRGLMS 180 SFMAMAPVSD SNTVFSSSGF PMQDFKPTLN FSLDGFETGY GNLQVQGVEE SGARLLFPME 240 ELKQQVPSTN ELDQQNRGQG DSSTGFWSSN GMLGGSGGHW S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46590.1	2e-47	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO87914