PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OMO87619

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

BES1

Protein Properties

Length: 436aa MW: 48161.3 Da PI: 6.7745

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO87619	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	149.9	2.1e-46	159	272	25	142
DUF822 25 iaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssl 125 aa iy+GLRaqGny+lpk++DnneVlkALc+eAGwvve+DGttyrkg++p+ ++ gss++++p ss++ s+ ssa++sp++s + sp+sssfpsp+++ OMO87619 159 FAANIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGCRPP-PIDIPGSSTKITPFSSQNPSPLSSAFPSPIPSCQVSPSSSSFPSPTRV 258 69************************************************.******************************************** PP DUF822 126 dsislasaasllpvlsv 142 d ++++ sllp+l+ OMO87619 259 DPNNSS---SLLPFLRS 272 9885...67777654 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MIRLFKVKEK QKEAAADGKA FITKQSAGEL RLHKDMSELN LPKECKMSFP NGKDDLLNFE 60 VTIRPNEGYY SRGNFEFSFQ VPHTYPHEPP KVKCKTKVYH PNIDLEGNVC LNILREDWKP 120 VLNINTIIYG LCHLFTQPNY EDPLNSDAAT VLRDNPQQFA ANIYTGLRAQ GNYNLPKHCD 180 NNEVLKALCA EAGWVVEEDG TTYRKGCRPP PIDIPGSSTK ITPFSSQNPS PLSSAFPSPI 240 PSCQVSPSSS SFPSPTRVDP NNSSSLLPFL RSAIPSSLPP LRISSSAPVT PPLSSPTSRN 300 PKPIPNWEAL AKESMASFNY PFYAVSAPAS PTHRQFHAPA TIPECDESDT STVESGQWIS 360 FQKFAPSTLQ VPTSPTFNLV KPVAPQSLPN DFINEKGRGS EFQFESGQVK PWEGERIHEV 420 GLDDLELTLG SGKARC

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MIRLFKVKEK QKEAAADGKA FITKQSAGEL RLHKDMSELN LPKECKMSFP NGKDDLLNFE  60
VTIRPNEGYY SRGNFEFSFQ VPHTYPHEPP KVKCKTKVYH PNIDLEGNVC LNILREDWKP  120
VLNINTIIYG LCHLFTQPNY EDPLNSDAAT VLRDNPQQFA ANIYTGLRAQ GNYNLPKHCD  180
NNEVLKALCA EAGWVVEEDG TTYRKGCRPP PIDIPGSSTK ITPFSSQNPS PLSSAFPSPI  240
PSCQVSPSSS SFPSPTRVDP NNSSSLLPFL RSAIPSSLPP LRISSSAPVT PPLSSPTSRN  300
PKPIPNWEAL AKESMASFNY PFYAVSAPAS PTHRQFHAPA TIPECDESDT STVESGQWIS  360
FQKFAPSTLQ VPTSPTFNLV KPVAPQSLPN DFINEKGRGS EFQFESGQVK PWEGERIHEV  420
GLDDLELTLG SGKARC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	1e-120	BES1 family protein

Link Out ? help Back to Top
Ensembl	OMO87619