PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO87449

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 573aa MW: 62726.1 Da PI: 7.0951

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO87449	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.7e-11	413	471	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe kv++L++e ++L ++ +l+ + l+s++ OMO87449 413 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQVTMLQRDSVGLTSQN 471 9********************************************99998888777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MKMEGISESR NNMQKLQSPP SHSIPRPQTN LDIPILNASQ MAASSPSHTR LSPENNTSNK 60 RPAGIPPSHP NYSASSSPYS QIIGSRSNSQ QGVPSHSRSL SQPTFFSLDS LPPWSTSPYT 120 EPSASSLSDP VSNDVSMEER VVNSNVRPSL PSPVSRGGNE FRVGENLSLP PRKGHRRSSS 180 DVPLGFSAMI QSSPQLIPIG SRGVLDRSVS SRESSGVEKP YQLVKRESEW SKEGSNNGEG 240 SGERKTEGDV ADDLFNAYMN LDNLETLNSS GTEDKDLDSR ASGTKTFGGE SSDNEVESRL 300 NGHRISMQGM SSGVSSDRRE GVKRSAGGDI APTTRHYRSV SMDSYMGSLQ FEDESPKIPP 360 LGNRAGQLSP GSSADANSSK FNFELSGTEF NEFELKKIME NDKLAEIASL DPKRAKRILA 420 NRQSAARSKE RKMRYISELE HKVQTLQTEA TTLSAQVTML QRDSVGLTSQ NNELKFRIQA 480 MEQQAQLKDA LNEALAAEVQ RLKLSAAELG GEAHLSNCMA QQLSINNPTF DLQPQQSQQM 540 NAYQMQQQQP QHGQRNQLQN QQQNGEVTAN KSK

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MKMEGISESR NNMQKLQSPP SHSIPRPQTN LDIPILNASQ MAASSPSHTR LSPENNTSNK  60
RPAGIPPSHP NYSASSSPYS QIIGSRSNSQ QGVPSHSRSL SQPTFFSLDS LPPWSTSPYT  120
EPSASSLSDP VSNDVSMEER VVNSNVRPSL PSPVSRGGNE FRVGENLSLP PRKGHRRSSS  180
DVPLGFSAMI QSSPQLIPIG SRGVLDRSVS SRESSGVEKP YQLVKRESEW SKEGSNNGEG  240
SGERKTEGDV ADDLFNAYMN LDNLETLNSS GTEDKDLDSR ASGTKTFGGE SSDNEVESRL  300
NGHRISMQGM SSGVSSDRRE GVKRSAGGDI APTTRHYRSV SMDSYMGSLQ FEDESPKIPP  360
LGNRAGQLSP GSSADANSSK FNFELSGTEF NEFELKKIME NDKLAEIASL DPKRAKRILA  420
NRQSAARSKE RKMRYISELE HKVQTLQTEA TTLSAQVTML QRDSVGLTSQ NNELKFRIQA  480
MEQQAQLKDA LNEALAAEVQ RLKLSAAELG GEAHLSNCMA QQLSINNPTF DLQPQQSQQM  540
NAYQMQQQQP QHGQRNQLQN QQQNGEVTAN KSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-126	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO87449