PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO86285 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | bHLH | ||||||||
Protein Properties | Length: 211aa MW: 23701.3 Da PI: 12.0046 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14 | 9.1e-05 | 138 | 179 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 rE+r + ++ +L +l+P + +Kls + iLe++ +YI L OMO86285 138 REKRKLPAVERKLKTLGRLVPGC-----RKLSFSNILEETSDYIAAL 179 67777778889999*******99.....8***************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MASFLPNLDP GPDTSPEFKR KKRRKTDQTP SSFDRNQATQ RIKRWRTERE QQIYSTKLIE 60 ALRRSRSRTS SSSSSSAPGK QVRETADRVL AFSARGTTRW SRAILAARLG GGATLLRKHK 120 KAKVAANRRL RKPEMINREK RKLPAVERKL KTLGRLVPGC RKLSFSNILE ETSDYIAALE 180 MQVRAMTALT ELLAGGSVQP PADRLASNVN S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 25 | KRKKRRK |
2 | 21 | 25 | KKRRK |
3 | 128 | 143 | RRLRKPEMINREKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06590.2 | 9e-29 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO86285 |