PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO85983 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 223aa MW: 24564.2 Da PI: 5.813 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.6 | 7.7e-19 | 52 | 102 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+Wv+e+r+p +k+ r++lg+f tae+Aa+a++ a+ +l+g OMO85983 52 PVYRGVRRRN-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 102 68*****888.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MMDSGSVSSP ISDSGSASYG RPANFSDEDV MLASSCPKKR AGRKKFRETR HPVYRGVRRR 60 NSGKWVCEVR EPNKKSRIWL GTFPTAEMAA RAHDVAAIAL RGRSACLNFA DSAWRLPVPA 120 STDPKDIQKA AAEAAEAFRP AEHSDGYSGD DAKIRAENTE AEKTTVSENG FYFDEEALFG 180 TQRYFANMAE GMLLSPPRCG YNGADEQEND AADDYVPLWS YSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 7e-79 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO85983 |