PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO85944 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | bHLH | ||||||||
Protein Properties | Length: 247aa MW: 27492 Da PI: 7.0311 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.8 | 5.2e-10 | 75 | 126 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + + +e+Er+RR+++ + ++Lr+llP + ++K ++ +Av+YIk+L+ OMO85944 75 KIMRKEIERQRRQQMANLSAQLRSLLPVeS---IKGKRAVSDHMNEAVNYIKYLR 126 66789***********************56...9*******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MFPTIYNQND DEFLYEISGI PHYMDFGQQN LTISGQPGIT DSSTSTQKLG KGRRLKKSVP 60 IPNNDGNGET NDAKKIMRKE IERQRRQQMA NLSAQLRSLL PVESIKGKRA VSDHMNEAVN 120 YIKYLRKRIQ ELSVKREKLK KLSGNFDQGT SATSSNSDNN SSSQINCVAI HPYCGGVEIV 180 INSGFGDESS HLSLIMQAII EEGLDVIRCV SSQMSEGFCH TIQSEISDPT LQLDLPGLQS 240 RLNDLIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51780.1 | 5e-37 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO85944 |