PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO85751

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 273aa MW: 31286.2 Da PI: 9.2381

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO85751	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26	2e-08	227	248	5	26
CHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka 26 +r++r++kNRe+A rsR+RK++ OMO85751 227 RRQKRMIKNRESAARSRARKQE 248 69******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MEGDRGRTER DDVMTRELDM GRLAEDGHPD VILLTLLAPF KHHSYNTYGP KPKQNKQQMF 60 LKIFRLSKKT VDEVWKEIVD HGNVNAAMNN QFVQHHHLTL GETTLEDFLV RASVINTGTN 120 QNGVINPNQQ YMTIDPMAVV SQQADWLQYQ MSAVQQQQIT MMDSNFSVPH HESVYENQVV 180 DVGFPENQLA MTSMPLPSMS ATSSDSQANT SARRRRYSDG MEKTIERRQK RMIKNRESAA 240 RSRARKQEVE VLLSSNTNPQ PKYQLRRTSS ASF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	6e-30	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO85751