PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

OMO85005

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 200aa MW: 22339.5 Da PI: 10.0804

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO85005	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.8	2.6e-09	99	139	4	44
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k+ +r NR +A +sR++K++++e+Le++v + +a+ +a OMO85005 99 PKKLKRVLANRASAHKSRLKKLEYVEKLEREVLVQQAKISA 139 5899***************************9776666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MPPKFQISTP MNTEGSNSSS SLDMTKLTSS LEATEPVKAL LHQGSASDSL TGVKRPCLVG 60 QGSSQSPHEV EISENSSSSL VGQTKPPKWS RSLDSEMDPK KLKRVLANRA SAHKSRLKKL 120 EYVEKLEREV LVQQAKISAL APEVAFKRAQ RNMLQQENDE MRRKMEILEK KKADKDAEFT 180 KLKHERDVLA LTRALQEEGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	3e-19	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO85005