PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO83008
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 406aa    MW: 43978.7 Da    PI: 6.8454
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO83008genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.31.8e-09208256553
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
               kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l   +
  OMO83008 208 KRAKRILANRQSAARSKERKARYIIELERKVQTLQTEATTLSAQLTLFQ 256
               9****************************************99887655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MEIQDLRDKS SHNPNLSSAK KMSGMPSNTP TIFGSCSSNN NNNNYNTNNG SNCSSGANSS  60
CSAFTRGGGA GAHHRRAHSE MSFRLPDDMS IMMMDLSPPT DPMNAGGGSS TASLEEIGSE  120
DDLFSTYIDV DKLNSASDAA NVRTNCTDHS EGEKLTSSST TTTTTTPSSR SRHRHSNSVD  180
GSVYGEVMDA KKAMPPDKLA ELWTLDPKRA KRILANRQSA ARSKERKARY IIELERKVQT  240
LQTEATTLSA QLTLFQRDTT GLSTENTELK LRLQAMEQQA HLRDALNEAL KKEVERLKIA  300
TGEMMSPSES FSLGMQHMPY TASTFLPIPP QQGAAGHQNM ALPNFTGSQS SMSTQHIPQT  360
NPHHLSDIMQ NDPLGRLQGL DISSKGSNLV KSEGPSISAS ESSTTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.12e-86bZIP family protein