PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OMO81689 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 244aa MW: 27805.7 Da PI: 6.5209 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.7 | 4.8e-14 | 66 | 118 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+ +hn+ Er RR++ Ns ++ Lr llP a a+ kKls ++ +A +YI +Lq OMO81689 66 RKLNHNASERDRRRKFNSLYSSLRALLPAA--AQMKKLSFPATISHALKYIPELQ 118 6889*************************6..5*******************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 244 aa Download sequence |
MCALAPYPIP SWPLVNPIGC YEQKYMYEGS ESIESLFLQL PPSQEEIHQV DDQSPSFNSC 60 DPGRVRKLNH NASERDRRRK FNSLYSSLRA LLPAAAQMKK LSFPATISHA LKYIPELQEE 120 VERLVEKKEK LLQRISQQGG LKLEEQKRKS RNGRNLGAAV SIEGLSESEV AIHITMAKAH 180 KKSDQLSEIL QYLEQDGMFL LLNATSFESF GGMVFYNIHL QVERIDNYKA ESEVLSEKLL 240 SLFD |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 76 | 81 | DRRRKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56980.1 | 2e-38 | bHLH family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OMO81689 |