PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO79733
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 360aa    MW: 40048.5 Da    PI: 5.6892
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO79733genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.85.4e-29135195259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs+edp+++e+tY+g+H++ 
  OMO79733 135 DDGYSWRKYGQKDILGAKYPRSYYRCTYRntkNCWATKQVQRSDEDPTIFEVTYRGTHTCA 195
               8***************************98999*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MEQRLNWEQG TLISELIQGM ELAKQLRVHL GTASSAESRE LLVQKILSSY ENALLILKLS  60
GPMGQPPQQQ NVGATSGCVP ESPLSINGGS PRSDDFDKDN NNQEIRDVSK KRKMMPRWTD  120
QVKVSSESML EGPHDDGYSW RKYGQKDILG AKYPRSYYRC TYRNTKNCWA TKQVQRSDED  180
PTIFEVTYRG THTCAHGNQA AIPPPASPEK IDLKSKTLNN NNNPQLQSQD ILLNLRKGLR  240
VNTQGLDNKE MAPSFSFPST SFGYLKSENH SFLPSGVLDN DNFFGSFSSP FMSPATPELN  300
YFSASHSQSD NFGGILNAYQ SESDLTGLIS ANTSATNSPI MDLDFSLDPN FPFDTPGFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.15e-78WRKY family protein