PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO78918 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 28160.2 Da PI: 9.5541 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26 | 1.6e-08 | 170 | 210 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L OMO78918 170 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 210 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MEIEQLKSAT EDQMEMMMMM QMDKLPEFFG AYNDVVELPP AEAELSPGAS NNNTSAMPHF 60 VETPPFINHL PTISFNGSTP VQEPGGAAAA VAAGFLSSPG GSARWRGGAG ELSGANAFST 120 PSQKKNSMAA MREMIFRIAA MQPIHIDPES IKPPKRRNVK ISKDPQSVAA RHRRERISER 180 IRILQRLVPG GTKMDTASML DEAIHYVKFL KTQVQSLERA AANRPTTTGL GFPVAMSNGS 240 TFLPMGKVPF QNVQQFGDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67060.1 | 7e-43 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO78918 |