PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO77423
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family G2-like
Protein Properties Length: 311aa    MW: 33287.1 Da    PI: 7.0432
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO77423genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.8e-3095148155
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
               +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  OMO77423  95 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 148
               59*******************.********************************8 PP
2Myb_DNA-binding48.12.7e-1597147148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
         OMO77423  97 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 147
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MREEDSNWFA RWEEELPSPE ELMPLSQTLI TPDLAIAFDI RNPNHQQRPP SQQAPPPPSA  60
AAQPPSQPTS AEFAADSGDL GSGAAGDEPA RTLKRPRLVW TPQLHKRFVD AVAHLGIKNA  120
VPKTIMQLMS VDGLTRENVA SHLQKYRLYL KRMQGLSGGG GGGAAGANGG AGGGASADPA  180
TDHLFASSPV PPHFLHPGRG NSEHFLPFVP VPALQHHHQQ QQIVAAAVGH PHLQSQYHRQ  240
MGHFGSSPNG QFEHPFLARQ TQQPIHRIGV GGAPPVHNQV PNSYVEDLES ANGNGGNGGR  300
KVLTLFPTGD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.11e-87G2-like family protein