PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO77374

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 740aa MW: 80897.3 Da PI: 5.4407

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO77374	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.3	2.9e-22	250	312	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L++e++++k e+++l +e+ OMO77374 250 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIKSEYEQLLAEN 312 89*********************************************************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MGSSEMDKAA KEKEPKTPPA ATTQEQSSTT NSGTVNADWS GFQGSYPFSP FAMPSPNGIV 60 EASGNTPGGI ETDGKPSEVK EKLPIKRSKG SLGSLNMITG KNNNPGKTLG ASANGVYSKS 120 AESGSEGTSE GSDANSQSDS QLKSGGRQDS GEGEASQNGS SAHGSQNGGP NARALVNAAI 180 PVVPISTAGA ATAVPGPTTN LHIGMDYWGA PASSTIPAMR GKVPSTPVAG GIVTPASRDS 240 VQSQLWLQDE RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRAEALKEE NASLRSEVSR 300 IKSEYEQLLA ENTSLKERLG EIPGHEELKS GRNDQHTNNN DGQKELVQGL NRRTNRADVE 360 LTDTAPQAAH RRLLGTRCSS FCLPRLGIAP DKYRARCLTM RASGESGDNL SPIAPVELES 420 PVGQLLSQIL KTHPHLLPAA IDQQLENLQS DKDDQKEEAA ASQDLLYKRI AEVKEKERRR 480 TLEEILYCLI VQKFVDNEIS MIPKIMPTSD PTGRVDFWPN QEEKLERVHS PEAFEMIESH 540 LSLVLGDRVV GPLSTIVQIS KIKLGKLYAA SIMYGYFLRR VDQRFQLERT MKTLPEDFTK 600 DQARFEFPNP GKQLWDPDSL ISIPPDDDNG SDGGGYMDTA EGKSYRLRSY VMYLDSETLQ 660 RYATIRSKEA ISLIEKQTQA LFGRPDIQVL DDGSLDTSSD EVVSITFAGL TMLVLEAVAF 720 GSFLWDAESY VESKYHFLKS

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MGSSEMDKAA KEKEPKTPPA ATTQEQSSTT NSGTVNADWS GFQGSYPFSP FAMPSPNGIV  60
EASGNTPGGI ETDGKPSEVK EKLPIKRSKG SLGSLNMITG KNNNPGKTLG ASANGVYSKS  120
AESGSEGTSE GSDANSQSDS QLKSGGRQDS GEGEASQNGS SAHGSQNGGP NARALVNAAI  180
PVVPISTAGA ATAVPGPTTN LHIGMDYWGA PASSTIPAMR GKVPSTPVAG GIVTPASRDS  240
VQSQLWLQDE RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRAEALKEE NASLRSEVSR  300
IKSEYEQLLA ENTSLKERLG EIPGHEELKS GRNDQHTNNN DGQKELVQGL NRRTNRADVE  360
LTDTAPQAAH RRLLGTRCSS FCLPRLGIAP DKYRARCLTM RASGESGDNL SPIAPVELES  420
PVGQLLSQIL KTHPHLLPAA IDQQLENLQS DKDDQKEEAA ASQDLLYKRI AEVKEKERRR  480
TLEEILYCLI VQKFVDNEIS MIPKIMPTSD PTGRVDFWPN QEEKLERVHS PEAFEMIESH  540
LSLVLGDRVV GPLSTIVQIS KIKLGKLYAA SIMYGYFLRR VDQRFQLERT MKTLPEDFTK  600
DQARFEFPNP GKQLWDPDSL ISIPPDDDNG SDGGGYMDTA EGKSYRLRSY VMYLDSETLQ  660
RYATIRSKEA ISLIEKQTQA LFGRPDIQVL DDGSLDTSSD EVVSITFAGL TMLVLEAVAF  720
GSFLWDAESY VESKYHFLKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	267	273	RRSRLRK
2	267	274	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-100	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO77374