PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO76345 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 27058.2 Da PI: 4.6615 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 5.9e-20 | 117 | 167 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrd k +r++lg+f+taeeAa a+++a+++++g OMO76345 117 HYRGVRKRP-WGKYAAEIRDS---SrKGARVWLGTFDTAEEAALAYDKAALRIRG 167 7********.**********3...2234*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MAVENREHGA GTESILENVW ANFIGGEEAN TATKSSESWE ELPSLDGRDG SMELLERLPS 60 LGRWISMGAD AWENLLDEIF LPSTGDIIEP SINGISNTRQ GPQVKKSVRV EKVATRHYRG 120 VRKRPWGKYA AEIRDSSRKG ARVWLGTFDT AEEAALAYDK AALRIRGPKA YLNFPLETVA 180 KAMDPAFTNN RKRGSRDWEE NNEVVMVEEP TPKRMATVEE YDVVEFQDLG SDYLESLLSS 240 F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18450.1 | 4e-34 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO76345 |