PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO74855
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 302aa    MW: 33436.9 Da    PI: 6.3495
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO74855genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.12.9e-11173218550
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
               kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  OMO74855 173 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 218
               8999*********************************999987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MPTLANFSTS STTTTTTSST TMNGSSNHHH HHPSWVDEFL DFSSARRGAH RRSISDSIAF  60
LEQPLVEECR DNANAMMTET SNVFDRLDDE QLMSMFSDDV AVTVAAAAPT LSSSNPSSPS  120
DQNSNNDEKL APSLDLQQPK HEPGEVESSC KSETQATQPL PTSSNSDSIV DPKRVKRILA  180
NRQSAQRSRV RKLQYISELE RSVTTLQTEV SALSPRVAFL DHQRLILNVD NSALKQRIAA  240
LAQDKIFKDA HQEALKKEIE RLRQVYQQQQ NLKKMNNTAQ QQPCTTGTTT TTVDTAVAAS  300
EH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.14e-85bZIP family protein