PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OMO74817 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 123aa MW: 13841.7 Da PI: 9.3714 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 49.3 | 8.7e-16 | 4 | 100 | 1 | 95 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f k+l s v +++++ +p +f+e+ gg+ ++ + + d +g++W++ + y ++ ++ v+++ W +F+ka++L +gD ++F+ + + ++++ OMO74817 4 FTKEL--SEVDAKKQMAIPTNFVEHLpshgGGN---TQYIPVVDVDGKVWRFGY-YIRGENSpypkPVFQGEWHQFAKAKKLVAGDQITFRIETDAAGNPR 98 78899..99999999********6669984444...34799*************.544444456789************************8877777776 PP EE CS B3 94 vk 95 + OMO74817 99 YT 100 55 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 123 aa Download sequence |
MASFTKELSE VDAKKQMAIP TNFVEHLPSH GGGNTQYIPV VDVDGKVWRF GYYIRGENSP 60 YPKPVFQGEW HQFAKAKKLV AGDQITFRIE TDAAGNPRYT IAAQKPVSDK LFGHVIRGWG 120 QEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G25730.1 | 1e-08 | RAV family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | OMO74817 |