PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO74442 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | bHLH | ||||||||
Protein Properties | Length: 349aa MW: 38548.8 Da PI: 7.5925 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.9 | 3.6e-08 | 65 | 112 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + rE+ RRdr+N+ f eL l ++ ++++Ka+iL+ ++ +k+L OMO74442 65 LQKADREKLRRDRLNEHFLELGNALDPD----RPRNDKATILTDTILLLKDL 112 56778********************997....799***********999988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MDQLKNDAAA AAYVQSIPSS KSSIIEFRQP PIDRRAPSTT TTRTQPKPSQ RVDGEGKDCL 60 AARKLQKADR EKLRRDRLNE HFLELGNALD PDRPRNDKAT ILTDTILLLK DLTSQVTKLK 120 AEYSTLTEES RELTQEKNDL KEEKASLRSD IDNLNAQYQQ RVRTMFPWTT VDHSVVMAPT 180 SYPFPVPMAM APPAAIPIHP SMQPYPFFGN QNPGVIHNPC TTFVPYMTPN PMVEQQSTQH 240 VAPVAQPGSH SNASGKQDSN NKISGESKID KTVDSNDVAT DLELKTPGST ADQDLSSGQR 300 KLKKSLRNEN SNTEQSYSSR CSSSYSAQDS SSNSIVGGRK ADDRDGGKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 9e-80 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO74442 |