PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO74355

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 173aa MW: 19531.6 Da PI: 6.2398

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO74355	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.3	1.9e-14	34	92	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+++NRe+ArrsR RK++ ++ L v +L +eN++ +++ ++++ ++++e+ OMO74355 34 RKRKRMISNRESARRSRMRKQKHLDDLMGQVTQLRKENHEIMTRINLTTQHYMNVEAEN 92 6789**********************************************999988887 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MASSSPSGTS SGSSSTLMQN SGSEEDLQAL MDERKRKRMI SNRESARRSR MRKQKHLDDL 60 MGQVTQLRKE NHEIMTRINL TTQHYMNVEA ENSVLRAQAN ELSHRLQSLN EIIGFLNGSS 120 NEHNNNFDVH EDLSSTSTSF GFPEPAADSF LNPFNLAYLN QPIMASADNM FLY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	34	55	RKRKRMISNRESARRSRMRKQK
2	47	54	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	6e-52	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO74355