PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO72442 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | TCP | ||||||||
Protein Properties | Length: 210aa MW: 22607.5 Da PI: 7.3446 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 112.8 | 4.9e-35 | 46 | 127 | 8 | 73 |
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................ssssasec 73 ++++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tg+ s ++s++ OMO72442 46 SKDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGSgtvlaaheiscaagpissS--ASSAS 127 79********************************************************8888777777766655321..22111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MALHKFSSAT NGHQNSNVNS LVVVPTESTP KNQLGLPARK PVSSLSKDRH TKVNGRGRRV 60 RMPALCAARI FQLTRELGHR SDGETIEWLL RQAEPSIIAA TGSGTVLAAH EISCAAGPIS 120 SSASSASVSC QVQQVAVGSG GGVMAGMYAP PPSCRLDLCQ PMGFHYPALG RNGYQHMPFT 180 ALLLQPTTAE EVEERQHIEE EEEDIKHHHE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37000.1 | 2e-46 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO72442 |