PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO72171 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | NAC | ||||||||
Protein Properties | Length: 130aa MW: 15357.3 Da PI: 8.4588 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.2 | 2.3e-17 | 4 | 105 | 31 | 128 |
NAM 31 eevikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmhe 125 ++++e+d+y + ePw++ ++++++++yfF++ +kk+ +g+r nr++ sg+Wk + ke+++ + + g +k + + +g+ ++ +W++he OMO72171 4 GNMVQECDLYGHkEPWEIWDmfgGATHNQEDVYFFTQLKKKSCNGSRINRSVGSGTWKGEDSGKEIKDPrySPTPLGFRKRFRYEDGNPEQ--IGRWILHE 102 467999****8879****73244444466789***********************************98666667*********9887776..89****** PP NAM 126 yrl 128 yrl OMO72171 103 YRL 105 *98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MEMGNMVQEC DLYGHKEPWE IWDMFGGATH NQEDVYFFTQ LKKKSCNGSR INRSVGSGTW 60 KGEDSGKEIK DPRYSPTPLG FRKRFRYEDG NPEQIGRWIL HEYRLSDSLI KNDMDYVLCR 120 LRKNERGNKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 2e-18 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO72171 |