PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OMO69048 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
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Family | G2-like | ||||||||
Protein Properties | Length: 260aa MW: 30035.8 Da PI: 6.0851 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.1 | 1e-33 | 30 | 84 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFveav+qLGG++kAtPktil++m+vkgLtl+h+kSHLQk+Rl OMO69048 30 KPRLRWTVELHERFVEAVSQLGGPDKATPKTILKIMGVKGLTLYHLKSHLQKFRL 84 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 67.6 | 2.1e-21 | 32 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++v+av qlGg+ t+ktI + mg kg+tl+++ks++qk++ OMO69048 32 RLRWTVELHERFVEAVSQLGGPdkaTPKTILKIMGvKGLTLYHLKSHLQKFR 83 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MFHAKKPTFN TYDRVCEQGD SGLVLTTDPK PRLRWTVELH ERFVEAVSQL GGPDKATPKT 60 ILKIMGVKGL TLYHLKSHLQ KFRLGRHPQR DFHDQSVRNS RKVSELDFSR NDAIGIRACC 120 FNDHQIVQHT GEVSLEMELG SRLNEELEQV QKHLQMRIEA QGKYMQKILE KAEENTKYFG 180 IEKFGNIGTM DTIDFASHLN FPSLEELHYI PASEATTMEK QWKNTESPMV IWSNDFQPQD 240 IVNETPDFHS DGESFQDDNI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79430.2 | 9e-69 | G2-like family protein |
Link Out ? help Back to Top | |
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Ensembl | OMO69048 |