PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO66745
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 302aa    MW: 34003.7 Da    PI: 4.8466
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO66745genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.21.2e-111441871959
               SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY  19 efprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  +sY+rCt +   gC+++k+v+r ++d + +++tY g+H+++
  OMO66745 144 AWRKSYFRCTRKydqGCKATKQVQRMEDDSQKFQTTYIGTHTCR 187
               5678******998899*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGTTLSPCSE KLLPSNKKSL IEELVHGQEC ATQLQILFHK SVPKEEDGFR RLSAEELVQK  60
ILKSFNETIS ALSSSDSADV VSQNQATNYS TDDISPCCDD RRSEDSSESR KKLSASKDKR  120
GCYKRKRSAQ TWVVVSSTTD DGQAWRKSYF RCTRKYDQGC KATKQVQRME DDSQKFQTTY  180
IGTHTCRDSF KAPKIFTTDS DQSLEEPNYN ANHCVESKNV IIPTIKQEAK EETTTATSDL  240
TDTMIMWKDI MAESGMSDYG DVVSSVYSCN EITSACRSFE MDFGIKAVGV DQFDGDFQFD  300
DM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110127RKKLSASKDKRGCYKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-28WRKY family protein