PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO64319
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 337aa    MW: 37852.2 Da    PI: 5.9373
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO64319genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.12e-29119180159
               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
               ldDgy+WrKYGqK++ gs+fpr+YYrCt++   gC ++k+v+rs++dp+++e++Y+g+H+++
  OMO64319 119 LDDGYCWRKYGQKDILGSNFPRGYYRCTHRhsrGCLATKQVQRSDQDPSIFEVKYRGRHTCN 180
               59***************************99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MMDWEQKTLL NELTQGRELT NLLRKHLHPS SSPQTRQALL EKILFSYEKA LSMLNCTGFV  60
VETKPTGSTL ESPASVIANN SSPRSEGSDK KDVIKKRKTS SGWTEQVRVC SGTSLEGPLD  120
DGYCWRKYGQ KDILGSNFPR GYYRCTHRHS RGCLATKQVQ RSDQDPSIFE VKYRGRHTCN  180
QASQFAAATP KSNHSRQKQQ LEEKQKQTQE TFLSFGTGLK VKTEELDNRE DIFPSFTFPV  240
GSEEVDNTGM FVNSLMENDI MGNLSPAISE SNYFSVSPCH MDSFGNLGQN VQTSESDLTE  300
IISAPTSVTN SPIGDLDFSS LDKLEFDPFY NPEIFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-55WRKY family protein