PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO63688
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 366aa    MW: 39508.9 Da    PI: 5.8902
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO63688genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.49.9e-11166218557
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
               kr++r + NR +A rs +RK  +i eLe+kv++L++e ++L  +l   +    
  OMO63688 166 KRAKRIIANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLTLFQRDTT 218
               9****************************************999877666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MQDPPSLNPN PDPPIPSNAS SSTGQTPPSF PNPTPFRGSY HRRAQSEVQF RIPDDLDLVS  60
DPFEGLGSED DLFCSYMDIE KLGGSSKGGA DEGGGAAGSS SGGSGQNPKG DEMSGGSGMG  120
EKNNGAGKGR HRYSNSVDGC SLMESIEAKK AMAPDKLAEL WTIDPKRAKR IIANRQSAAR  180
SKERKARYIS ELERKVQTLQ TEATTLSAQL TLFQRDTTGL TTENTELKLR LQAMEQQAQL  240
RDALNEALKK EVERLKVATG EMSTPTDNFN LGMHHIPYTQ SSFFPPQPQH MQVDSQNIQM  300
PQFHPFQSNM LAPNQSVMAA SNSHTFADMM QQDPLGRLQG LDIGGRGSHL VKSEGPSISA  360
GESGGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.11e-120bZIP family protein